Charloe Baey Postdoctoral fellow in Applied Mathematics

22 rue Ernest Renan 92130 Issy-les-Moulineaux - France H +33 686 377 207 B charlo[email protected] Í hp://charloe.baey.free.fr

Experience 2014–now Postdoctoral fellow, Institute for Life Science Modelling (IMSV), Paris-Saclay. Plant growth modelling for genotype differentiation.

2013–2014 A.T.E.R. (Teaing Assistant), École Centrale Paris, France. 2010–2014 PhD in Applied Mathematics, École Centrale Paris, France. 2008–2010 Biostatistician, Institute Gustave Roussy, France. Meta-analysis of clinical trials in oncology

PhD thesis Title University Supervisor Reviewers

Modelling inter-individual variability in plant growth models and model selection for prediction École Centrale Paris, MAS laboratory, Digiplant team Paul-Henry Cournède Philippe de Reffye and Marc Lavielle

Education 2007–2008 2006–2008 2005–2006 2002–2005

Master in Statistics, University Pierre and Marie Curie (UPMC), Paris, France, summa cum laude. Biostatistician Degree, ISUP (Institute of Statistics of UPMC), Paris, France, magna cum laude. Maîtrise of mathematics (1st year of master), UPMC, Paris, France, magna cum laude. Licence of mathematics (Baelor), UPMC, Paris, France, cum laude.

Teaching 2010–2013 Teaching assistant for first-year students (Licence 3) at École Centrale Paris : { Analysis (10h) { Probability (10h) { Statistics (10h) 2010–2013 Supervision of students’ projects in biostatistics

Skills Language French Native speaker English Fluent (T.O.E.I.C. score: 890)

Computer skills Statistics R, Scilab/Matlab, Winbugs, SAS Programming C/C++, Git, OpenMP, CMake (notions)

Scientific activities 2010-2014 Representative of PhD students at the MAS laboratory council 2014-2015 Organization of the Digiplant seminar

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Articles [1] C Baey, S Trevezas, and P.-H. Cournède. A nonlinear mixed effects model of plant growth and estimation via stochastic variants of the EM algorithm. Communications in Statistics - eory and Methods, Accepted, 2014. [2] C Baey, A Didier, S Lemaire, F Maupas, and P.-H. Cournède. Parametrization of five classical plant growth models applied to sugar beet and comparison of their predictive capacities on root yield and total biomass. Ecological Modelling, in press, 2014. [3] P.-H. Cournède, Y Chen, Q Wu, C Baey, and B Bayol. Development and Evaluation of Plant Growth Models: Methodology and Implementation in the PYGMALION platform. Mathematical Modelling of Natural Phenomena, 8(4):112–130, June 2013. [4] C Baey, A Didier, S Lemaire, F Maupas, and P.-H. Cournède. Modelling the interindividual variability of organogenesis in sugar beet populations using a hierarchical segmented model. Ecological Modelling, 263:56–63, 2013. [5] C Baey and M.-C. Le Deley. Effect of a misspecification of response rates on type I and type II errors, in a phase II Simon design. European Journal of Cancer, 47(11):1647–1652, 2011.

Oral communications [1] C Baey, S Trevezas, and P-H Cournède. Modélisation de la variabilité inter-individuelle dans les modèles de croissance de plante. In 46èmes Journées de la Société Française de Statistique, Rennes, France, June 2014. [2] C Baey, S Trevezas, and P-H Cournède. Modélisation de la variabilité inter-individuelle dans les modèles de croissance de plante. In Colloque Jeunes Probabilistes et Statisticiens, Forges-les-Eaux, France, April 2014. [3] C Baey, S Trevezas, and P-H Cournède. A nonlinear mixed effects model to expain inter-individual variability in plant populations. In 15th Applied Stochastic Models and Data Analysis Conference, Barcelona, Spain, June 2013. [4] C Baey, A Didier, S Lemaire, and P-H Cournède. Evaluation of the predictive capacity of five plant growth models for sugar beet. In 4th International Symposium on Plant Growth Modelling, Simulation, Visualization and Application (PMA), Shanghai, China, November 2012. [5] C Baey, A Didier, S Lemaire, and P-H Cournède. Using a hierarchical segmented model to assess the dynamics of leaf appearance in plant populations. In 14th Applied Stochastic Models and Data Analysis Conference, Roma, Italy, June 2011.

Invited talks [1] C Baey. Enjeux et défis en modélisation de la croissance des plantes : quels outils statistiques ?, Steptember 11 2014. Invited talk for the monthly seminar of Alumni Association of ISUP. [2] C Baey. A statistical approach to model variability in plant populations, June 12 2014. Invited talk in Department of Biometry and Environmental System Analysis, Freiburg University.

Poster [1] A nonlinear mixed effects of plant growth and estimation via stochastic variants of the EM algorithm. In MCMSki, Chamonix, France, January 2014. Awarded Best Poster.

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