CV - Yves Desdevises

CURRICULUM VITAE Yves Desdevises, Ph.D. Professor Observatoire Océanologique de Banyuls-sur-Mer (OOB) Sorbonne Université (SU), FR 3724 UMR CNRS 7232 BIOM (Integrative Biology of Marine Organisms) Team INTERMED (Marine Interactions – Evolution and aDaptation) 66650 Banyuls-sur-Mer, France Phone / Fax: (33) (0)4 68 88 73 13 / (33) (0)4 68 88 16 99 E-mail: [email protected] Web site: http://desdevises.free.fr Researcher ID: http://www.researcherid.com/rid/D-5528-2011 ResearchGate profile: researchgate.net/profile/Yves_Desdevises/ Key-Words: Evolution, Phylogenetics, Interactions, Cospeciation, Comparative Method, Virus, Picoeukaryotes, Parasites, Monogeneans, Fish, Molecular Biology, Numerical Ecology, Marine Biology EDUCATION 2008

Habilitation à Diriger les Recherches (Accreditation to supervise research, Université Pierre et Marie Curie UPMC, now Sorbonne Université - SU, Biology). "Evolution and specificity in symbiotic systems"

1997-2001

Ph.D. at the University of Perpignan, France (Biology) and the University of Montreal, Canada (Biological Sciences), in joint supervision (Thèse en cotutelle). Supervisors: Serge Morand and Pierre Legendre. Mention "très honorable avec félicitations du jury". "Study of the determinants of host-specificity in the system Lamellodiscus (Diplectanidae, Monogenea)-Sparidae (Teleostei) in the Mediterranean"

1993 1992 1991 1990

DEA (M.Sc.) in Biological Oceanography (UPMC - University of Quebec at Rimouski), mention "bien" M. Sc. in Biology, speciality in marine ecology (UPMC), mention "assez bien" Licence (B.Sc.) in Biology (UPMC) DEUG in Life Sciences (Paris 11), mention "assez bien"

EXPERIENCE 2015 2014 2002-2014 1997

Professor 1rst Class UPMC

1996

Technician at the MLI from September to December in the laboratory of Dr D. Marcogliese. Parasitological examination of Killifish (Fundulus heteroclitus) Technician at the MLI from June to September in the laboratory of Dr J.-M. Sévigny. Study of a population of Lobster (Homarus americanus) via RAPD (random amplified polymorphic DNA) Technician at the MLI in March in the laboratory of Dr J. R. Arthur. Parasitological examination of Turbot (Reinhardtius hippoglossoides)

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Professor 2nd Class UPMC Assistant Professor UPMC Technician at the Maurice-Lamontagne Institute (MLI, Department of Fisheries and Oceans, Canada, Mont-Joli, Quebec) in March in the laboratory of Dr D. Marcogliese. Coloration and identification of parasites of Rockfish (Sebastes mentella) Technician at the MLI from January to March under the supervision of B. Morin and E. Albert. Parasitological examination of Turbot (Reinhardtius hippoglossoides)

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1994-1995

Research assistant at the Department of Oceanography of the University of Quebec at Rimouski from May 1994 to October 1995. Study of the impact of the contamination of the Eastern Canadian Arctic on the local ecosystem and Inuit populations. Field mission in Ungava Bay. Work in physiology and parasitology on the Arctic charr (Salvelinus alpinus). Supervision by Dr J. Pellerin-Massicotte, Dr J. R. Arthur and Dr C. Audet

1993

Research practical at the INRS-Océanologie (Canada, Québec) from April to June. Study of the stress of fish kept in mesocosm. Work in ecophysiology, ecotoxicology and ethology in the laboratory of Dr C. Audet Research practical in the laboratory of Dr J. Pellerin-Massicotte in October and November. Ecotoxicology on marine invertebrates

PUBLICATIONS 1. Desdevises Yves, J. Richard Arthur & Jocelyne Pellerin-Massicotte. 1998. Parasites of Anadromous Arctic Char (Salvelinus alpinus) from two sites in Ungava Bay (Quebec, Canada). Journal of the Helminthological Society of Washington. 65(1): 87-90. 2. Sasal Pierre, Yves Desdevises & Serge Morand. 1998. Host-specialization and species diversity in fish parasites: phylogenetic conservatism? Ecography 21: 639-643. 3. Cornell Stephen J., Yves Desdevises & Mark C. Rigby. 1999. Evolutionary Biology of Host-Parasite Relationships: Reality meets Models. Trends in Ecology and Evolution. 14(11): 423-425. 4. Simková Andrea, Yves Desdevises, Milan Gelnar & Serge Morand. 2000. Coexistence of guild ectoparasites on a freshwater fish (Rutilus rutilus): history and present ecology. International Journal for Parasitology 30: 1077-1088. 5. Desdevises Yves, Richard Jovelin, Olivier Jousson & Serge Morand. 2000. Comparison of ribosomal DNA sequences of Lamellodiscus spp. (Monogenea, Diplectanidae) parasitizing Pagellus (Sparidae, Teleostei) in the North Mediterranean Sea: species divergence and coevolutionary interactions. International Journal for Parasitology 30: 741-746. 6. Desdevises Yves, Serge Morand & Guy Oliver. 2001. Linking Specialization to Diversification in the Diplectanidae Bychowsky, 1957 (Monogenea, Monopisthocotylea). Parasitology Research 87(3): 223-230. 7. Desdevises Yves. 2001. The phylogenetic position of Furnestinia echeneis (Monogenea, Diplectanidae) based on molecular data: a case of morphological adaptation? International Journal for Parasitology 31(2): 205-208. 8. Simková Andrea, Yves Desdevises, Milan Gelnar & Serge Morand. 2001. Morphometric correlates of host specificity in Dactylogyrus species (Monogenea) parasites of European Cyprinid fish. Parasitology 123(2): 169-177. 9. Morand Serge, Andrea Simková, Iveta Matejusova, Laetitia Plaisance, Olivier Verneau & Yves Desdevises. 2001. Investigating patterns may reveal processes: evolutionary ecology of ectoparasitic monogeneans. International Journal for Parasitology 32(1): 111-119. 10. Legendre Pierre, Yves Desdevises & Eric Bazin. 2002. A new statistical method to assess host-parasite coevolution. Systematic Biology 51(2): 217-234. 11. Desdevises Yves, Serge Morand & Pierre Legendre. 2002. Evolution and determinants of specificity in the genus Lamellodiscus (Monogenea). Biological Journal of the Linnean Society 77(4): 431-443. 12. Desdevises Yves, Serge Morand, Olivier Jousson & Pierre Legendre. 2002. Coevolution between Lamellodiscus (Monogenea) and Sparidae (Teleostei): the study of a complex host-parasite system. Evolution 56(12): 2459-2471. 13. Desdevises Yves, Pierre Legendre, Lamia Azouzi & Serge Morand. 2003. Quantifying phylogenetically-structured environmental variation. Evolution 57(11): 2647-2652. 14. Makarenkov Vladimir, Pierre Legendre & Yves Desdevises. 2004. Modelling phylogenetic relationships using reticulated networks. Zoologica Scripta 33(1): 89-96. 15. Sasal Pierre, Yves Desdevises, Eric Durieux, Philippe Lenfant & Pascal Romans. 2004. Parasites in marine protected areas: success and specificity of monogeneans. Journal of Fish Biology 64(2): 370-379. 16. Arnal Céline, Olivier Verneau & Yves Desdevises. 2006. Phylogenetic relationships and evolution of cleaning behaviour in the family Labridae: importance of body colour pattern. Journal of Evolutionary Biology 19: 755-763. 17. Isorna Esther, Laurence Besseau, Gilles Boeuf, Yves Desdevises, Robin Vuilleumier, Angel L. Alonso-Gómez, María J. Delgado & Jack Falcón. 2006. Retinal, pineal and diencephalic expression of frog arylalkylamine n-acetyltransferase-1. Molecular and Cellular Endocrinology 252: 11-18. 18. Desdevises Yves. 2006. Determinants of parasite species richness on small taxonomical and geographical scales: Lamellodiscus monogeneans of northwestern mediterranean sparid fish. Journal of Helminthology 80: 235-241. 19. Desdevises Yves. 2007. Cophylogeny: insights from fish-parasite systems. Parassitologia 49(3): 125-128. 20. Cubo Jorge, Pierre Legendre, Armand De Ricqlès, Laetitia Montes, Emmanuel De Margerie, Jacques Castanet & Yves Desdevises. 2008. Phylogenetic, functional and structural components of variation in bone growth rate of amniotes. Evolution and Development 10(2): 217-227. 26/06/18

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21. Piganeau Gwenael, Yves Desdevises, Evelyne Derelle & Herve Moreau. 2008. Picoeukaryotic sequences in the Sargasso sea metagenome. Genome Biology 9(1). 22. Kaci-Chaouch Taous, Olivier Verneau & Yves Desdevises. 2008. Host specificity is linked to intraspecific variability in the genus Lamellodiscus (Monogenea). Parasitology 135(5): 607-616. 23. Derelle Evelyne, Conchita Ferraz, Marie-Line Escande, Sophie Eychenié, Richard Cooke, Gwénaël Piganeau, Yves Desdevises, Laure Bellec, Hervé Moreau & Nigel Grimsley. 2008. Life-cycle and genome of OtV5, a large DNA virus of the widespread pelagic marine unicellular green alga Ostreococcus tauri. PLoS One: 3(5): e2250. doi:10.1371/journal.pone.0002250. 24. Jousselin Emmanuelle, Yves Desdevises & Armelle Coeur d’Acier. 2009. Fine scale cospeciation between species of the aphid genus Brachycaudus and their obligatory endosymbiont Buchnera aphidicola: can bacterial genome help refining species delimitation and evolutionary relationships in aphids? Proceedings of the Royal Society of London B 276: 187-196. 25. Lami Raphaël, Jean-François Ghiglione, Yves Desdevises, Nyree West & Philippe Lebaron. 2009. Annual patterns of presence and activity of marine bacteria monitored by 16S rDNA-16S rRNA fingerprints in the coastal MW Mediterranean Sea. Aquatic Microbial Ecology 54: 199-210. 26. Bellec Laure, Nigel Grimsley, Hervé Moreau & Yves Desdevises. 2009. Phylogenetic analysis of new Prasinoviruses (Phycodnaviridae) that infect the green unicellular algae Ostreococcus, Bathycoccus and Micromonas. Environmental Microbiology Reports 1(2): 114-123. 27. Legendre Pierre & Yves Desdevises. 2009. Independent contrasts and regression through the origin. Journal of Theoretical Biology 259: 727-743. 28. Bellec Laure, Nigel Grimsley & Yves Desdevises. 2010. Isolation of Prasinoviruses of the green unicellular algae Ostreococcus spp. at a worldwide geographical scale. Applied and Environmental Microbiology 76(1): 96-101. 29. Poisot Timothée & Yves Desdevises. 2010. Putative speciation events in Lamellodiscus (Monogenea, Diplectanidae) assessed by a morphometric approach. Biological Journal of the Linnean Society 99: 559-569. 30. Bellec Laure, Nigel Grimsley, Evelyne Derelle, Hervé Moreau & Yves Desdevises. 2010. Abundance, spatial distribution and genetic diversity of Ostreococcus tauri viruses in two different environments. Environmental Microbiology Reports 2(2): 313-321. 31. Montagné Nicolas, Yves Desdevises, Daniel Soyez & Jean-Yves Toullec. 2010. Molecular evolution of the Crustacean Hyperglycemic Hormone family in ecdysozoans. BMC Evolutionary Biology 10: 62. 32. Beltran Sophie, Yves Desdevises, Julien Portela & Jérôme Boissier. 2010. Mating systems and evolutionary trade-offs between morpho-anatomical features in Schistosomatidae. BMC Evolutionary Biology 10: 245. 33. Tessier Anne, Timothée Poisot, Pascal Romans & Yves Desdevises. 2010. Putative Effects of recreational fishing of Paracentrotus lividus on populations of sea urchins in Mediterranean shallow water. Vie et Milieu. 60(4): 299-305. 34. Moreau Hervé, Gwenael Piganeau, Yves Desdevises, Richard Cooke, Evelyne Derelle & Nigel Grimsley. 2010. Marine prasinovirus genomes show low evolutionary divergence and acquisition of protein metabolism genes by horizontal gene transfer. Journal of Virology 84(24): 12555-12563. 35. Desdevises Yves, Maillet Vincent, Fuentes Michael & Escriva Hector. 2011. A snapshot of the population structure of Branchiostoma lanceolatum (Cephalochordata: Branchiostomidae) in the Racou beach, France during its spawning season. PLoS One 6(4): e18520. 36. Zitko Toni, Ana Kovačić, Yves Desdevises & Jasna Puizina. 2011. Genetic variations of the Asian tiger mosquito, Aedes albopictus (Skuse) (Diptera: Culicidae) in East-Adriatic populations inferred from NADH5 and COI sequence variability. European Journal of Entomology 108: 501-508. 37. Karsenti Eric, Silvia González Acinas, Peer Bork, Chris Bowler, Colomban de Vargas, Jeroen Raes, Matthew B Sullivan, Detlev Arendt, Francesca Benzoni, Mick Follows, Olivier Jaillon, Gabriel Gorsky, Pascal Hingamp, Daniele Iudicone, Stefanie Kandels-Lewis, Uros Krzic, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Emmanuel G Reynaud, Christian Sardet, Michael E Sieracki, Sabrina Speich, Didier Velayoudon, Jean Weissenbach, Patrick Wincker & Tara Oceans Consortium (Abergel, C., Arslan, D., Audic, S., Aury, J.M., Babic, N. S., Beaufort, L., Bittner,, Boss, E., Boutte, C., Brum, J., Carmichael, M., Casotti, R., Chambouvet, A., Chang, C., Chica, C., Claverie, J-M., Clerissi, C., Colin, S., Cornejo-Castillo, F.M., d'Ortenzio, F., d'Ovidio, F., Da Silva, C., De Monte, S., Decelle, J., Desdevises, Y., Dimier C., Dolan, J., Duhaime, M., Durrieu de Madron, X., Ferrera, I., Garczarek, L., Garet-Delmas, M.J., Gasol, J.M., Grimsley, N., Heilig, R., Ignacio-Espinoza, J., Jamet, J.L., Karp-Boss, L., Katinka, M., Khalili, H., Le Bescot, N., Le Goff, H., Lima-Mendez, G., Mahé, F., Mazzocchi, M.G., Montresor. M., Morin, P., Noel, B., Pedrós-Alió, C., Pelletier, E., Perez, Y., Picheral, M., Piganeau, G., Poirot, O., Poulain, J., Poulton, N., Prejger, F., Prihoda, J., Probert, I., Rampal, J., Reverdin, G., Romac, S., Romagnan, J.B., Roullier, F., Rouviere, C., Samson, G., Santini, S., Sarmento, H., Sciandra, A., Solonenko, S., Stemmann, L., Subirana, L., Sunagawa, S., Tanaka, A., Testor, P., Thompson, A., Tichanné-Seltzer, V., Tirichine, L., Toulza, E., Veluchamy, A., Zingone A. 2011. A holistic approach to marine eco-systems biology. PLoS Biology 9(10): e1001177. 38. Poisot Timothée, Olivier Verneau & Yves Desdevises. 2011. Morphological and molecular evolution are not linked in Lamellodiscus (Plathyhelminthes, Monogenea). PLoS One 6(10): e26252. 37. 26/06/18

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39. Galand Pierre, Muriel Bourrain, Emmanuel De Maistre, Philippe Catala, Yves Desdevises, Hila Elifantz, David L. Kirchman & Philippe Lebaron. 2012. Phylogenetic and functional diversity of Bacteria and Archaea in a unique stratified lagoon of the Clipperton atoll (N Pacific). FEMS Microbiology Ecology 79(1): 203-217. 40. Clerissi Camille, Yves Desdevises & Nigel Grimsley. 2012. Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species-specific. Journal of Virology 86(8): 4611-4619. 41. Mendlová Monika, Yves Desdevises, Kristína Civáňová, Antoine Pariselle & Andrea Šimková. 2012. Monogeneans of West African cichlid fish: evolution and cophylogenetic interactions. PLoS One 7(5): e37268. 42. Grimsley Nigel H., Rozenn Thomas, Jessica U. Kegel, Stéphan Jacquet, Hervé Moreau & Yves Desdevises. 2012. Genomics of Algal Host-Virus Interactions. Advances in Botanical Research 64: 343-381. 43. Decelle Johan, Ian Probert, Lucie Bittner, Yves Desdevises, Sébastien Colin, Colomban de Vargas, Martí Galí, Rafel Simó & Fabrice Not. 2012. An original mode of symbiosis in open ocean plankton. Proceedings of the National Academy of Sciences USA 109(44): 18000-18005. 44. Morin Violeta, Andrea Sanchez-Rubio, Antoine Aze, Claudio Iribarren, Jenaro Garcia-Huidobro, Claire Fayet, Yves Desdevises, Maria Imschenetzky, Marcia Puchi & Anne-Marie Genevière. 2012. The protease degrading sperm histones postfertilization in sea urchin eggs is a nuclear cathepsin L that is further required for cleavage stages. PLoS One 7(11): e46850. doi:10.1371/journal.pone.0046850. 45. Jacquet Stéphan & Yves Desdevises. 2012 EMBO conference series : viruses of Microbes (from exploration to applications in the -omics era). Belgique, Bruxelles, Académie Royale Militaire, 16 au 20 juillet 2012. Virologie 16(5). doi:10.1684/vir.2012.0463. 46. Clerissi Camille, Nigel Grimsley & Yves Desdevises. 2013. Genetic exchanges of inteins between Prasinoviruses (Phycodnaviridae). Evolution 67(1): 18-33. 47. Hingamp Pascal, Nigel Grimsley, Silvia G. Acinas, Camille Clerissi, Lucie Subirana, Julie Poulain, Isabel Ferrera, Hugo Sarmento, Emilie Villar, Gipsi Lima-Mendez, Karoline Faust, Shinichi Sunagawa, Jean-Michel Claverie, Hervé Moreau, Yves Desdevises, Peer Bork, Jeroen Raes, Colomban de Vargas, Eric Karsenti, Stefanie Kandels-Lewis, Olivier Jaillon, Fabrice Not, Stéphane Pesant, Patrick Wincker & Hiroyuki Ogata. 2013. Exploring nucleocytoplasmic large DNA viruses in Tara Oceans microbial metagenomes. The ISME Journal 7: 1678-1695. 48. Mladineo Ivona, Tanja Šegvić-Bubić, Rino Stanić & Yves Desdevises. 2013. Morphological plasticity and phylogeny in a monogenean parasite transferring between wild and reared fish populations. PLoS One 8(4), e62011. doi:10.1371/journal.pone.0062011.s011. 49. Subirana Lucie, Bérangère Péquin, Stéphanie Michely, Marie-Line Escande, Julie Meilland, Evelyne Derelle, Gwenaël Piganeau, Yves Desdevises, Hervé Moreau & Nigel Grimsley. 2013. Morphology, genome plasticity, and phylogeny in the genus Ostreococcus reveal a cryptic species O. mediterraneus (sp. nov., Mamiellales, Mamiellophyceae). Protist 164: 643-659. 50. Deng Jun, Fang Yu, Hai-Bin Li, Marco Gebiola, Yves Desdevises, San-An Wu & Yan-Zhou Zhang . 2013. Cophylogenetic relationships between Anicetus parasitoids (Hymenoptera: Encyrtidae) and their scale insect hosts (Hemiptera: Coccidae). BMC Evolutionary Biology 13:275. 51. Sarabeev Volodimir & Yves Desdevises. 2014. Phylogeny of the Atlantic and Pacific species of Ligophorus (Monogenea: Dactylogyridae): morphology vs. molecules. Parasitology International 63(1): 9-20. 52. Clerissi Camille, Nigel Grimsley, Hiroyuki Ogata, Pascal Hingamp, Julie Poulain & Yves Desdevises. 2014. Diversity of prasinoviruses (Phycodnaviridae) in marine samples unveiled using next generation sequencing analyses of PCR-amplified DNA polymerase and Major Capsid Protein genes. Applied and Environmental Microbiology 80(10): 3150-3160. 53. Bellec Laure, Camille Clerissi, Roseline Edern, Elodie Foulon, Nathalie Simon, Nigel Grimsley & Yves Desdevises. 2014. Cophylogenetic interactions between marine viruses and eukaryotic picophytoplankton. BMC Evolutionary Biology 14: 59. 54. Clerissi Camille, Nigel Grimsley, Lucie Subirana, Eric Maria, Louise Oriol, Hiroyuki Ogata, Hervé Moreau & Yves Desdevises. 2014. Prasinovirus distribution in the Northwest Mediterranean Sea is affected by the environment and particularly by phosphate availability. Virology 466-467: 146-157. 55. Bellec Laure & Yves Desdevises. 2015. Quand virus et hôtes évoluent ensemble : la fidélité est-elle la règle ? Virologie 19(3): 140-148. 56. Baudoux Anne-Claire, Hugo Lebredonchel, Hanna Dehmer, Marie Latimier, Roseline Edern, Florence Rigaut-Jalabert, Pei Gei, Laure Guillou, Elodie Foulon, Yann Bozec, Thierry Cariou, Yves Desdevises, Evelyne Derelle, Nigel Grimsley, Hervé Moreau & Nathalie Simon. 2015. Interplay between Micromonas species and their viruses in the Western English Channel. Environmental Microbiology Reports 7(5): 765-773. 57. Faure, Denis, Patricia Bonin, Robert Duran & The Microbial Ecology EC2CO consortium. 2015. Environmental microbiology as a mosaic of explored ecosystems and issues. Environmental Science and Pollution Research 22(18): 13577-13598. 58. Camille Clerissi, Yves Desdevises, Sarah Romac, Stéphane Audic, Colomban de Vargas, Silvia G Acinas, Raffaela Casotti, Julie Poulain, Patrick Wincker, Pascal Hingamp, Hiroyuki Ogata & Nigel Grimsley. 2015. Deep sequencing of amplified 26/06/18

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Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes. Environmental Microbiology Reports 7(6): 979-989. 59. Medlin Linda K. & Yves Desdevises. 2016. Phylogeny of ‘araphid’ diatoms inferred from SSU and LSU rDNA, rbcL and psbA sequences. Vie et Milieu 66(2): 129-154. 60. Simon Nathalie, Elodie Foulon, Daphné Grulois, Christophe Six, Yves Desdevises, Marie Latimier, Florence Le Gall, Margot Tragin, Aude Houdan, Evelyne Derelle, Fabien Jouenne, Sophie Le Panse, Daniel Vaulot & Birger Marin. 2017. Revision of the genus Micromonas (Manton et Parke) (Chlorophyta, Mamiellophyceae), of the type species M. pusilla (Butcher) Manton & Parke and of the species M. commoda (van Baren, Bacry and Worden) and description of two new species based on the genetic and phenotypic characterization of cultured isolates. Protist 168(5): 612-635. 61. Blanc-Mathieu Romain, Marc Krasovec, Maxime Hebrard, Sheree Yau, Elodie Desgranges, Joel Martin, Wendy Schackwitz, Alan Kuo, Gerald Salin, Cecile Donnadieu, Yves Desdevises, Sophie Sanchez-Ferandin, Hervé Moreau, Eric Rivals, Igor V. Grigoriev, Nigel Grimsley, Adam Eyre-Walker & Gwenaël Piganeau. 2017. Population genomics of picophytoplankton unveils novel chromosome hypervariability. Science Advances 3(7): e1700239. 62. Medlin Linda K. & Yves Desdevises. 2018. Sequence Analysis Confirms a New Algal Class. Vie & Milieu, in press.

BOOK CHAPTERS 1. Desdevises Yves & Emmanuelle Jousselin. 2016. La cospéciation, in the chapter “La spéciation” (Ravigné V, Barberousse A, Bierne, N, Britton-Davidian J, Capy P, Desdevises Y, Giraud T, Jousselin E, Moulia C, Smadja C, Samadi S), in Biologie Evolutive 2nd Edition (1st in 2010); by Frédéric Thomas, Thierry Lefèvre, Michel Raymond (eds). De Boeck. 2. Nieberding Caroline, Emmanuelle Jousselin & Yves Desdevises. 2010. The use of co-phylogeographic patterns to predict the nature of interactions, and vice-versa, in The geography of host-parasite interactions by Serge Morand and Boris Krasnov (eds). Oxford University Press. 3. Desdevises Yves, Serge Morand, Boris R. Krasnov & Julien Claude. 2015. Comparative analysis - recent developments and uses with parasites, in Parasite diversity and diversification: evolutionary ecology meets phylogenetics by Serge Morand, Boris Krasnov & Tim Littlewood (eds). Cambridge University Press.

BOOK TRANSLATIONS 1. Triola Marc & Triola Mario. 2009. Biostatistique pour les sciences de la vie et de la santé. Pearson Education. Translated in French by Yves Desdevises & Gilles Hunault. http://www.pearson.fr/livre/?GCOI=27440100720130

BOOK REVIEWS 1. Desdevises Yves. 2007. Discovering Evolutionary Ecology: Bringing together ecology and evolution, by Peter Mayhew, Oxford University Press, 2006. Vie et Milieu 57(3): 190. 2. Desdevises Yves. 2008. Marine Parasitology, by Klaus Rohde (Ed.). Integrative and Comparative Biology. doi: 10.1093/icb/icn003.

OTHER PUBLICATIONS 1. Payrot Jérôme, Pascal Romans, Bruno Ferrari, Yves Desdevises, Jean-François Laffon, Philippe Lenfant, Caroline Lafargue, Olivier Bianchimani & Pierre Drap. 2012. Suivi de la population de corail rouge (Corallium rubrum) sur la Côte Vermeille. 53 p.

EVALUATION ACTIVITIES •

Referee for: Acta Parasitologica; Advances in Parasitology; The American Naturalist; Annales Zoologici Fennici; Biological Invasions; Biological Journal of the Linnean Society; BMC Evolutionary Biology; BMC Genomics; Comparative Parasitology; Diseases of Aquatic Organisms; Ecography; Evolution; Ecology Research; Folia Parasitologica; Genome Biology; International Journal for Parasitology; Journal of Biogeography; Journal of Evolutionary Biology; Journal of Fish Biology; Journal of Parasitology; Journal of the Marine Biological Association; Journal of Virological Methods; Molecular Biology and Evolution; Molecular Ecology; Molecular Phylogenetics and Evolution; Parasite; Parasites and Vectors; Parasitology; Parasitology International; Parasitology Research; Phycologia; PLoS One; Proceedings of the Royal Society of London B; Symbiosis; Systematic Biology; Systematic Parasitology; Veterinary Parasitology; Veterinary Research Communications; Vie et Milieu (Life and Environment); Viruses

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External referee for a PhD proposal for the IFREMER (2016)

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External referee of projects for the Czech Science Foundation (2014)

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Member of the Evaluation Committee SVSE 7 for the Agence Nationale de la Recherche (ANR) (2013)

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Referee of a book on statistics for Springer (2009, 2010)

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External referee for projects in the program “Research in Paris“ (Ville de Paris, 2012)

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External referee for 2 ANR Jeunes Chercheurs grant proposals (2008, 2010)

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External referee for a regional grant proposal (2009)

CONFERENCE PRESENTATIONS (in bold: invited speaker) 1. Desdevises Yves, Jocelyne Pellerin-Massicotte & J. Richard Arthur. Parasites de l'omble chevalier anadrome (Salvelinus alpinus L.) de la Baie d'Ungava (Québec) et leur influence sur la condition physiologique de l'hôte. Poster presented at the Annual Symposium of the Canadian Society of Zoology. Rimouski (Quebec), Canada, 10-13 May 1995. 2. Desdevises Yves & Lamia Azouzi. Étude de la structure spatiale de la densité dans une population du bivalve Macoma balthica (L.) en zone intertidale. Poster presented at the symposium Petit Pois Déridé. Lille, France, 14-17 September 1998. 3. Desdevises Yves. Recherche d'un lien entre spécialisation et diversification chez les monogènes. Oral presentation at the symposium Petit Pois Déridé. Lille, France, 14-17 September 1998. 4. Desdevises Yves. Étude du lien entre spécialisation et diversification chez les monogènes. Oral presentation at the IXème Symposium. de Sciences Biologiques. Université de Montréal, 28 January 1999. 5. Desdevises Yves, Serge Morand & Pierre Legendre. A Framework To Test The Determinants of Specificity. Oral presentation at the symposium Evolutionary biology of host-parasite relationship: reality meets models. European Science Foundation Workshop, Banyuls-sur-Mer, France, 3-7 May 1999. 6. Desdevises Yves, Serge Morand & Pierre Legendre. Phylogenetics Influences on the Host Specificity of Lamellodiscus (Monogenea). Poster presented at the symposium Interrelationships of the Platyhelminthes. The Linnean Society, London, UK, 1416 July 1999. 7. Desdevises Yves, Serge Morand & Pierre Legendre. Historical and Ecolocical Influences on the Host Specificity of Lamellodiscus (Monogenea). Oral presentation at the 5th International Symposium on Fish Parasites. Ceske Budejovice, Czech Republic. 9-13 August 1999. 8. Simková Andrea, Yves Desdevises, Milan Gelnar & Serge Morand, 2000. Coexistence of congeneric monogeneans (Dactylogyrus, Dactylogyroidea). Acta Parasitologica (Abstacts: VIII European multicolloquium of parasitology) 45: 267. 9. Desdevises Yves, Serge Morand & Pierre Legendre. Link Between Molecular and Morphometric Evolution in a Host-Parasite System: the Study of Adaptive Processes. Oral presentation at the symposium Phylogeny and Correlated Evolution. Detection and Structural Implications. Paris, France, 16 March 2000. 10. Simková Andrea, Yves Desdevises, Milan Gelnar & Serge Morand. Aggregation and niche specialisation of congeneric monogeneans. Proceedings of the Ninth Helminthological Days, 5-8 June, 2000, Dolní Vìstonice, Czech Republic. Helminthologia 37, 3: 172. 11. Desdevises Yves. Morphological and morphometric evolution in the genus Lamellodiscus (Monogenea, Diplectanidae): phylogenetic constraints and adaptive processes. Oral presentation at the Annual Symposium of the Canadian Society of Zoology. Sudbury (Ontario), Canada, 9-12 May 2001. 12. Desdevises Yves. Coevolution between Lamellodiscus and Sparidae: the study of a complex host-parasite association. Oral presentation at the Fourth International Symposium on Monogenea, Brisbane, Australia, 9-13 July 2001. 13. Desdevises Yves. Study of complex coevolutionary interactions in a fish-monogenean system. Poster presented at the symposium Réseau pour l'Étude de la Biodiversité des Nématodes et des Helminthes. Muséum National d'Histoire Naturelle, Paris, France, 17-19 September 2001. 14. Legendre Pierre, Yves Desdevises & Eric Bazin. ParaFit : comment tester une hypothèse de coévolution entre des parasites et leurs hôtes. Oral presentation. Pages 257-261 in: SFC'2002: Actes du IXème Congrès de la Société Francophone de Classification, Toulouse, France, 16-18 September 2002. 15. Houdan Aude, Evelyne Derelle, Francisco Rodriguez, Yves Desdevises, Nathalie Simon, Hervé Moreau & Daniel Vaulot. Prasinophycea as targets for comparative environmental genomics (Roscoff, Banyuls, Naples). Oral presentation at the First Annual Meeting of Marine Genomics Europe, Banyuls-sur-Mer, France, 07-12 February 2005. 16. Desdevises Yves, Francisco Rodriguez, Evelyne Derelle, Laure Guillou, Florence Le Gall, Daniel Vaulot, Laure Bellec & Hervé Moreau. Adaptation in Ostreococcus ecotypes (Chlorophyta, Prasinophycea). Oral presentation at the 10th Congress of the European Society for Evolutionary Biology, Krakow, Poland, 15-20 August 2005. 17. Isorna Esther, Laurence Besseau, Yves Desdevises, Robin Vuillemier, Angel L. Alonso-Gomez, Maria J. Delgado & Jack Falcon Arylalkylamine N-Acetyltransferase is expressed in central and peripheral tissues in the water greenfrog, Rana perezi. Poster presented at the X Congress of the European Pineal Biological Rhythms Society. Frankfurt, Germany, 1-5 September 2005. 18. Desdevises Yves, Aude Houdan, Evelyne Derelle, Hervé Moreau & Daniel Vaulot. Diversity and adaptation in oceanic picoalgal ecotypes. Oral presentation at the 9th Evolutionary Biology Meeting, Marseilles, France, 21-23 September 2005. 26/06/18

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19. Falcon Jack, Esther Isorna, Laurence Besseau, Yves Desdevises, Gilles Boeuf, Angel L. Alonso-Gomez & Maria J. Delgado. Expression of Arlylalkylamine N-Acetyltransferase in central and peripheral tissues of the green frog Rana perezi. Poster presented at the International Symposium on Signal Transduction in Health and Disease, Tel-Aviv, Israel, 26-28 October 2005. 20. Desdevises Yves, Kathia Lesdema, Evelyne Derelle & Hervé Moreau. Spatial and temporal biodiversity of prasinophytes picoeukaryotes in the Gulf of Lion investigated from genomic data. Poster presented at the symposium Marine Genomics 2006: An International Conference, Sorrento, Italy, 28 October-1 November 2006. 21. Piganeau Gwénaël, Séverine Jancek, Evelyne Derelle, Yves Desdevises, Nigel Grimsley & Hervé Moreau. Genome comparison of the smallest free-living eukaryotes of the genus Ostreococcus (Chlorophyta), an ideal model for research on eukaryotic genome evolution. Poster presented at the Conference Jacques Monod Evolutionary Genomics, Roscoff, France, 2-6 May 2007. 22. Tanguy Maël, Christine Pissavin-Castillo, Marilyne Queguiner, Yves Desdevises, Cariolet Roland, Gérald Le Diguerher, Christine Burel & Philippe Fravalo. Assessment of a molecular tool (CE-SSCP) to study balance of caecal flora of SPF piglet's groups. Oral presentation at the 7th international symposium on the epidemiology and control of foodborne pathogens in pork Safepork 2007, Verona, Italy, 9-11 May 2007. 23. Desdevises Yves, Céline Arnal & Olivier Verneau. Colour pattern and cleaning behaviour in Labridae (Teleostei): correlated evolution? Oral presentation at the 8th International Congress of Vertebrate Morphology. Paris, France, 16-21 July 2007 (Chairman of the Evolution session). 24. Desdevises Yves. Cophylogeny: insights from fish-parasite systems. Keynote speaker (and Chairman) in the Phylogeny and Host-Parasite Coevolutionary Aspects session at the 7th International Symposium on Fish Parasites, Viterbo, Italy, 24-28 September 2007. 25. Derelle Evelyne, Conchita Ferraz, Marie-Line Escande, Sophie Eychenié, Richard Cooke, Yves Desdevises, Laure Bellec, Hervé Moreau & Nigel Grimsley. Life-cycle and genome of OsV5, a large DNA virus of the ubiquitous pelagic marine unicellular green alga Ostreococcus tauri. Oral presentation at the workshop Genomics and Ecology of Aquatic Viruses, Banyuls-sur-Mer, France, 11-13 February 2008. 26. Bellec Laure, Nigel Grimsley & Yves Desdevises. Diversity of Prasinophyte-virus interactions in the N.W. Mediterranean. Oral presentation at the workshop Genomics and Ecology of Aquatic Viruses, Banyuls-sur-Mer, France, 11-13 February 2008. 27. Bellec Laure, Nigel Grimsley & Yves Desdevises. Viruses of Prasinophyceae in the N.W. Mediterranean. Oral presentation at the Aquatic Virus Workshop 5, Vancouver, Canada, 6-11 July 2008. 28. Grimsley Nigel, Evelyne Derelle, Marie-Line Escande, Sophie Eychenié, Richard Cooke, Yves Desdevises, Laure Bellec, Conchita Ferraz & Hervé Moreau. Genome and life cycle of OtV5, a Phycodnavirus of the pelagic marine unicellular green algae Ostreococcus tauri. Oral presentation at the Aquatic Virus Workshop 5, Vancouver, Canada, 6-11 July 2008. 29. Desdevises Yves, Taous Kaci-Chaouch & Olivier Verneau. Link between intraspecific variability and host specificity in Lamellodiscus monogeneans. Oral presentation at the European Multicolloquium on Parasitology, Paris, France, 24-28 August 2008 (Chairman of the "Host-parasite interactions & parasite communities" session). 30. Poisot Timothée & Yves Desdevises. Lamellodiscus (Monogenea, Diplectanidae) parasites of several sparid fish hosts: true generalists or ongoing speciation? Oral presentation at the European Multicolloquium on Parasitology, Paris, France, 24-28 August 2008. 31. Montagné Nicolas, Yves Desdevises, Daniel Soyez & Jean-Yves Toullec. Crustacean Hyperglycemic Hormone (CHH): a useful gene for Arthropod phylogenetics. Oral presentation at the 24th Conference of European Comparative Endocrinologists, Genoa, Italy, 2-6 September 2008. 32. Desdevises Yves. Statistics, with emphasis on small sample analysis. Invited speaker for the Workshop Brainstorming IV, Hannover, Germany, 26-27 September 2008. 33. Poisot Timothée, Olivier Verneau & Yves Desdevises. Genetic diversity within Lamellodiscus (Monogenea, Diplectanidae). Indications on diversification and potential use for taxonomy. Poster presented at the European Science Foundation, Workshop “Diversity, selection and adaptation in wildlife and livestock - molecular approaches”, Salzburg, Austria, 26-28 November 2008. 34. Bellec Laure, Nigel Grimsley & Yves Desdevises. Viruses from Ostreococcus sp. in the N.W. Mediterranean Sea. Oral presentation at the ASLO Aquatic Sciences Meeting, Nice, France, 25-30 January 2009. 35. Derelle Evelyne, Conchita Ferraz, Marie-Line Escande, Sophie Vidal-Eychenié, Richard Cooke, Gwénaël Piganeau, Yves Desdevises, Laure Bellec, Hervé Moreau & Nigel Grimsley. Characterisation and comparative genomics of green algal viruses. Poster presented at the ASLO Aquatic Sciences Meeting, Nice, France, 25-30 January 2009. 36. Clerissi Camille, Nigel Grimsley, Hervé Moreau & Yves Desdevises. Caractérisation de la spécificité des virus d’Ostreococcus tauri. Poster presented at the Journées thématiques de l’Association Française d’Ecologie Microbienne, "Les interactions microbiennes passées et présentes", Marseille, France, 4-5 May 2010. 37. Desdevises Yves. La méthode comparative ou comment utiliser la phylogénie dans la recherche d’adaptation. Invited speaker at the symposium Perspectives on vertebrate evolution: topics and problems, Collège de France, Paris, France, 14-16 June 2010. 38. Desdevises Yves, Hervé Moreau, Gwénaël Piganeau, Evelyne Derelle & Nigel Grimsley. Phylogenetic analyses of new 26/06/18

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prasinovirus genomes: gene origin, evolutionary interactions with hosts, and lateral gene transfers. Oral presentation at the symposium Viruses of Microbes, Institut Pasteur, Paris, France, 21-25 June 2010. 39. Bellec Laure, Nigel Grimsley & Yves Desdevises. Cospeciation in a marine algal-virus system. Poster presented at the symposium Viruses of Microbes, Institut Pasteur, Paris, France, 21-25 June 2010. 40. Clerissi Camille, Nigel Grimsley & Yves Desdevises. The host specificity of Ostreococcus tauri viruses. Poster presented at the symposium Viruses of Microbes, Institut Pasteur, Paris, France, 21-25 June 2010. 41. Derelle, Evelyne, Hervé Moreau, Gwenael Piganeau, Yves Desdevises, Richard Cooke & Nigel Grimsley. Genomic analyses reveal acquisition of novel protein metabolism genes and synteny in four new marine prasinoviruses. Poster presented at the symposium Viruses of Microbes, Institut Pasteur, Paris, France, 21-25 June 2010. 42. Galand Pierre E., Muriel Bourrain, Emmanuel De Maistre, Philippe Catala, Yves Desdevises, Hila Elifantz, David L. Kirchman & Philippe Lebaron. Phylogenetic and functional diversity of Bacteria and Archaea in the stratified lagoon of the Clipperton atoll (N Pacific). Oral communication at SAME12, 12th Symposium on Aquatic Microbial Ecology, Rostock/Warnemünde, Germany, 28 August- 2 September 2011. 43. Desdevises Yves, Laure Bellec, Camille Clerissi, Evelyne Derelle, Laure Subirana, Hervé Moreau, Evelyne Foulon, Roseline Edern, Julie Bergeret, Nathalie Simon & Nigel Grimsley. Cophylogenetic interactions between marine prasinoviruses and prasinophyte microalgae. Communication presented at the 6th Aquatic Virus Workshop, Texel, Netherlands, 30 October-3 November 2011. 44. Clerissi Camille, Nigel Grimsley & Yves Desdevises. Specificity, evolution, diversity and distribution of Prasinoviruses. Communication presented at the 6th Aquatic Virus Workshop, Texel, Netherlands, 30 October-3 November 2011. 45. Clerissi Camille, Nigel Grimsley & Yves Desdevises. Spécificité, évolution, diversité et distribution des Prasinovirus. Communication presented at the 5ème colloque de l’Association Française d’Ecologie Microbienne, Hammamet, Tunisia, 14-16 November 2011. 46. Clerissi Camille, Yves Desdevises & Nigel Grimsley. Genetic exchanges of inteins among Prasinoviruses (Phycodnaviridae). Communication presented at the ALPHY meeting (Bioinformatics and Evolutionary Genomics), Banyuls, France, 19-21 March 2012. 47. Desdevises Yves. Viruses from prasinophyte microalgae: specificity, evolution, and coevolutionary interactions. Communication presented at the Third Banyuls Delaware PUF workshop – Biodiversity and functioning of marine ecosystems, Banyuls, France, 30 May-1 June 2012. 48. Clerissi Camille, Lucie Subirana, Hervé Moreau, Hiroyuki Ogata, Nigel Grimsley, & Yves Desdevises. Diversity and distribution of prasinoviruses at a large geographical scale. Poster presented at the symposium Viruses of Microbes, Brussels, Belgium, 16-20 July 2012. 49. Carratalà Anna, Jérémie Garnodier, Manon Denjean, Camille Clerissi & Yves Desdevises. Desarrollo de un nuevo ensayo TRFLP para el estudio de la diversidad de las comunidades de virus que infectan microalgas. Spanish National Society of Microbiology. Oral communication presented at the IX Congreso de Microbiologia del Medio Acuático, Barcelona, 13-15 September 2012. 50. Payrot Jérôme, Pascal Romans, Bruno Ferrari & Yves Desdevises. Study of the red coral populations (Corallium rubrum) within and around the Cerbère-Banyuls marine reserve. Poster presented at the 2012 Forum of Marine Protected Areas in the Mediterranean. Antalya, Turkey, 25-28 November. 51. Desdevises Yves. The coevolutionary history of the smallest eukaryotes and their giant viruses: Prasinoviruses and microalgae. Invited talk (plenary talk). Trends in Biodiversity and Evolution Conferences, Vairão, Portugal, 6-7 December 2012. 52. Lebredonchel Hugo, Nigel Grimsley &Yves Desdevises. Temporal analysis of the prasinovirus-host interaction in a trophic gradient. Communication presented at the 7th Aquatic Virus Workshop, St. Petersburg, USA, 3-7 November 2013. 53. Clerissi Camille, Yves Desdevises, Eve Toulza, Stéphane Audic, Sarah Romac, Colomban de Vargas, Julie Poulain, Patrick Wincker, Pascal Hingamp, Hiroyuki Ogata & Nigel Grimsley. Diversity and distribution of prasinoviruses (Phycodnaviridae) in the Indian Ocean. Communication presented at the 7th Aquatic Virus Workshop, St. Petersburg, USA, 3-7 November 2013. 54. Simon Nathalie, Anne-Claire. Baudoux, Hugo Lebredonchel, Hanna Dehmer, Yann Bozec, Thierry Cariou, Yves Desdevises, Evelyne Derelle, Roseline Edern, Elodie Foulon, Nigel Grimsley, Fabienne Jalabert, Marie Latimier & Hervé Moreau. Interplay between prasinoviruses and Micromonas cryptic species in the Western English Channel throughout the year 2009. Poster presented at the Conference Jacques Monod Des virus émergents aux virus pandémiques : interaction entre écologie des hôtes et évolution virale, Roscoff, France, 2-6 avril 2014. 55. Simon Nathalie, Anne-Claire Baudoux, Hugo Lebredonchel, Hanna Dehmer, Yann Bozec, Thierry Cariou, Yves Desdevises, Evelyne Derelle, Roseline Edern, Elodie Foulon, Nigel Grimsley, Florence Jalabert, Marie Latimier & Hervé Moreau. Interplay between prasinoviruses and Micromonas cryptic species in the Western English Channel throughout the year 2009. Poster présented at the symposium Viruses of Microbes, Zurich, Switzerland, 14-18 July 2014. 56. Desdevises Yves. Giant viruses and tiny hosts: an entangled evolutionary history. Oral communication presented at the symposium Modern Phylogenetic Comparative Methods, Seville, Spain, 11-15 November 2014. 26/06/18

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57. Desdevises Yves, Raphaël Lami & Sylvie Gastineau. e-Marin’Lab : un projet alliant les capacités du numérique avec la dimension attractive de la biologie marine pour lutter contre l’échec à l’université. Oral communication presented at the 2ème Colloque International en Education, Montreal, Canada, 30 April-1st May 2015. 58. Renaud Vuillemin, Yves Desdevises, Pascal Conan, Pascal Romans & François Charles. Activités des navires de station à l'Observatoire Océanologique de Banyuls. Poster presented at the 3èmes journées de la Flotte océanographique française - colloque Flotte côtière, Bordeaux, France, 11-12 June 2015. 59. Desdevises Yves, Raphaël Lami & Sylvie Gastineau. e-Marin’Lab : un projet alliant les capacités du numérique avec les dimensions d’imaginaire et d’exploration de la biologie marine pour lutter contre l’échec à l’université. Oral communication presented at the symposium PédagoTICE, Toulouse, France, 29-30 juin 2015. 60. Baudoux Anne-Claire, Hugo Lebredonchel, Florence Rigaut-Jalabert, Hanna Dehmer, Marie Latimier, Roseline Edern, Yann Bozec, Thierry Cariou, Yves Desdevises, Evelyne Derelle, Nigel Grimsley, Hervé Moreau & Nathalie Simon. Interplay between Micromonas species and their viruses in the Western English Channel. Poster présented at the Second EMBO Conference on Aquatic Microbial Ecology: SAME-14, Uppsala, Sweden, 23-28 August 2015. 61. Lami Raphaël, Sylvie Gastineau, Yves Desdevises, Surya Dersoir & Nicole Rege Colet. E-Marin’Lab : un écosystème pédagogique en Sciences de la Mer. Oral communication presented at the symposium 29ème Congrès de l’Association Internationale de Pédagogie Universitaire (AIPU), Lausanne, Switzerland, 6-9 June 2016. 62. Dupont Samuel, Bruno Petton, Eve Toulza, Caroline Montagnani, Ana Lokmer, Yves Desdevises, David Pecqueur, Christophe Salmeron, Laure Guillou, Anne-Claire Baudoux, Christelle Desnues, Bernard La Scola, Julien de Lorgeril, Yannick Gueguen, Jean-Michel Escoubas. Composition et dynamique de l’hémo-microbiote de l’huître Crassostrea gigas : rôle de l’environnement et du fond génétique des animaux. Oral communication presented at the annual meeting of the Réseau Écologie des Interactions Durables, Toulouse, France, 22-24 March 2017. 63. Dupont Samuel, Bruno Petton, Eve Toulza, Ana Lokmer, Caroline Montagnani, Yves Desdevises, David Pecqueur, Christophe Salmeron, Laure Guillou, Christelle Desnues, Bernard La Scola, Julien de Lorgeril, Guillaume Mitta, Yannick Gueguen, JeanMichel Escoubas, Oyster’s blood-microbiota: Bacteria, Protists and Viruses, What else? Poster presented at the International Conference on Holobionts, Paris, France, 19-21 April 2017. 64. Benovics Michal, Yves Desdevises & Andrea Šimková. Dactylogyrus (Monogenea) parasitizing cyprinids from Balkan Peninsula: phylogeny and relationships to central European species. Oral communication presented at the 8th International Symposium on Monogenea, Brno, Czech Republic, 6-10 July 2017. 65. Participation to the Journées nationales de l’Innovation Pédagogique dans l’Enseignement Supérieur (JIPES), UPMC, Paris, France, 26-27 September 2017. Attribution of the PEPS prize (Passion Enseignement et Pédagogie dans le Supérieur, Ministère de l’Enseignement Supérieur, de la Recherche, et de l’Innovation) in the category "innovation pédagogique, mention numérique" for the e-Marin’Lab program. Oral communication about the prize. 66. Yves Desdevises. Introduction to comparative methods. A brief survey from 1985 to present. Invited talk (plenary talk). Journées Annuelles de la Société Française de Systématique, Banyuls, France, 25-27 October 2017. 67. Benovics Michal, Yves Desdevises & Andrea Šimková. Coevolutionary patterns between host specific monogeneans of genus Dactylogyrus and Peri-mediterranean cyprinids. Oral communication presented at the 6th Workshop of European Centre of Ichthyoparasitology, Velehrad, Czech Republic. 27-29 November 2017.

INVITED RESEARCH AND EDUCATION SEMINARS 1. Évolution moléculaire et morphométrique dans un système hôte-parasite: tendances évolutives et processus adaptatifs. Seminar presented at the University of Perpignan, France, on 18 April 2000. 2. Coévolution et spécificité dans le système hôte-parasite: Sparidae (Teleostei) et Lamellodiscus (Monogenea). Seminar presented at the University of Montreal, Canada, on 01 October 2001. 3. Phylogénie moléculaire et coévolution dans un système hôte-parasite méditerranéen. Seminar presented at the OOB on 07 May 2002. 4. Adaptation et contraintes phylogénétiques. Seminar presented at the OOB on 04 December 2003. 5. Adaptation et contraintes phylogénétiques. Seminar presented at the Centre de Biologie et de Gestion des Populations, Montpellier, France, on 20 January 2004. 6. Coloration et comportement de nettoyage chez les Labridae: évolution corrélée? Seminar presented at the OOB on 29 June 2006. 7. Cophylogénies: concepts et méthodes. Seminar presented on 21 June 2006 during the workshop "Comparative Phylogeography" (GDR INRA, Banyuls-sur-Mer 19-21 June 2006). 8. Specificity, adaptation and speciation in monogeneans. Seminar presented at the Masaryk University in Brno, Czech Republic, on 24 April 2008. 9. Spécificité, adaptation et spéciation chez les monogènes. Seminar presented at the OOB on 21 May 2008. 10. Partition de la variation phénotypique en contexte phylogénétique. Seminar presented at the University of Montpellier 2, France, on 31 March 2009. 26/06/18 9/16

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11. Cophylogeny, adaptation, and speciation in some host-parasite systems. Seminar presented at the Institute of Oceanography and Fisheries, Split, Croatia, on 10 December 2009. 12. Un aperçu des méthodes d'analyse comparative, ou comment être phylogénétiquement correct lors d'une étude corrélative en contexte évolutif. Seminar presented at the Université de Provence, Marseille, France, on 10 February 2010. 13. Cophylogénie : mesurer la congruence entre deux phylogénies. Bilan et développements récents. Seminar presented at the Université de Montpellier 2, France, on 31 January 2011. 14. Finding cophylogenetic patterns in symbiotic associations. Seminar presented at the Biological Station of Roscoff, France, on 15 February 2011. 15. Virus de microalgues prasinophytes : spécificité, évolution et interactions coévolutives. Seminar presented at the INRA station at Thonon-Les-Bains, France, on 23 May 2012. 16. The entangled evolutionary history of giant viruses and their tiny hosts. Seminar presented at the Masaryk University, Brno, Czech Republic, on 09 April 2015. 17. Interactions coévolutives entre microalgues et virus géants. Seminar presented at the Centre de Biologie et de Gestion des Populations, Montpellier, France, on 03 November 2015. 18. E-Marin’Lab - Un espace d’accompagnement pédagogique autour d’une plateforme d’enseignement en ligne en Sciences de la Mer. Seminar presented with Raphaël Lami during the Rencontres pédagogiques, UPMC, Paris, France, 28 September 2017. 19. Active learning with on online platform for marine sciences. Seminar presented with Raphaël Lami at Dalhousie University, Halifax, Canada, on 11 April 2018. 20. Coevolutionary interactions in (some) marine symbiotic systems. Seminar presented at Dalhousie University, Halifax, Canada, on 12 April 2018. 2I. Giant Viruses and Tiny Hosts - An Entangled Evolutionary History. Seminar presented at the Cavanilles Institute of Biodiversity and Evolutionary Biology, Universitat de Valencia, Spain, on 07 June 2018.

MEMBER OF JURIES 2018

Examiner for the PhD thesis of Juliette Auvinet "Eléments transposables et diversification des poissons antarctiques Notothenioïdes" (Supervisors: Agnès Dettaï et Dominique Higuet, SU) Examiner for the Habilitation à diriger les recherches of Frédéric Legendre, "Phylogenetic tests of evolutionary scenarios in interdisciplinary studies: improving the protocol design" (SU), President of the jury Invited member in the jury "Methods in Natural Sciences" at the 5th edition of the Young Natural History scientists’ Meeting (YNHM), MNHN, Paris, 6-10 March

2017

Examiner for the PhD thesis of Laura Urbini, “Models and algorithms to study the common evolutionary history of host and their symbionts” (Supervisors: Marie-France Sagot and Blerina Sinaimeri, University of Lyon 1) Examiner for the PhD thesis of Léa Girard, “Quorum sensing in Vibrios" (Supervisors: Marcelino Suzuki, Julia Baudart and Raphaël Lami, UPMC), President of the jury Member of the Doctoral thesis committee of Camille Huot (Supervisors: Eve Toulza and David Duval, University of Perpignan) Member of the Doctoral thesis committee of Ruibo Cai (Supervisor: Laure Guillou, CNRS)

2016

Examiner for the PhD thesis of Miriam Reverter, “Host-parasite interactions in coral reef fish” (Supervisors: Pierre Sasal, CNRS, David Lecchini, Ecole Pratique des Hautes Etudes, Perpignan) President of the recruiting committee for an engineer in animal experimentation techniques (UPMC) Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Guillaume Blanc (CNRS - Université Aix-Marseille) Examiner for the PhD thesis of Fátima Esperança Jorge, “Evolution of parasite-host associations in Spauligodon nematodes: from the inside out” (Supervisor: Miguel Ángel Carretero, CIBIO, University of Porto, Portugal)

2015

Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Céline Cosseau, “Implication de l’épigénétique pour la plasticité/variabilité phénotypique sur le modèle d’interaction Biomphalaria glabrata / Schistosoma mansoni” (UPVD) Examiner for the PhD thesis of Ninon Robin, “The epibionts of fossil decapod crustaceans” (Supervisor: Gilles Petit, UPMC) President of the recruiting committee for an engineer in education techniques (UPMC) Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Stéphanie Bertrand, “Cell-cell communication pathways and chordate Evo-Devo” (UPMC), President of the jury

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2014

Examiner for the PhD thesis of Carlos Mendoza-Palmero, “Species composition and phylogenetic relationships among monogenean parasites (Platyhelminthes: Dactylogyridae) of catfishes (Siluriformes) from the Amazon River basin” (Supervisor: Tomas Scholz, University of South Bohemia, Czech Republic) Examiner for the PhD thesis of Lucas Legendre, “Did the crocodiles became secondarily ectotherms?” (Supervisor: Jorge Cubo, UPMC), President of the jury Examiner for the PhD thesis of Leon Meyer, “Impact of invasive parasites on the biology and conservation of indigenous terrapins in South Africa and the south of France” (Supervisors: Olivier Verneau and Louis Du Preez, joint PhD (cotutelle), University of Perpignan - University of Potchefstroom (South Africa)) Examiner for the PhD thesis of Kevin Xu Zhong, “Freshwater viral abundances, structure and diversity : a special emphasis on T4-like, cyanophages and phycoDNAviruses in peri-alpine lakes“ (Supervisor: Stéphan Jacquet, INRA, Thonon-Les-Bains)

2013

Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Yvan Bettarel (CR1 IRD), “Ecology of tropical aquatic viruses” Member of the recruiting committee for an assistant engineer in administration (UPMC) Member of the Doctoral thesis committee of Lucas Legendre (Supervisor: Jorge Cubo, UPMC)

2012

Member of the Doctoral thesis committee of Sara Fneich (Supervisor: Christoph Grunau, University of Perpignan) Examiner for the PhD thesis of Mathieu Leray, “Role of biotic interactions on the structure of decapod communities associated to corals” (Supervisor: Suzanne C. Mills, EPHE, Perpignan) Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Hector Escriva (CR1 CNRS) Examiner for the PhD thesis of Damien Cazamea-Catalan, “Molecular adaptations to temperature of arylalkylamine-N-acetyltransferases enzymes in fish” (Supervisor: Jack Falcon, CNRS-UPMC, OOB)

2011

Member of the Doctoral thesis committees of Kevin Xu Zhong (Supervisor: Stéphan Jacquet, INRA, Thonon-lesBains), Leon Meyer (Supervisors: Olivier Verneau and Louis Du Preez, joint PhD (cotutelle), University of Perpignan - University of Potchefstroom (South Africa)) and Frédéric Lepelletier (Supervisor: Laure Guillou, CNRS-UPMC, Station Biologique de Roscoff)

2010

Examiner for the PhD thesis of Laetitia Antonelli, “Impact of the parasitism on pisciculture in Corsica. Parasitological inventory and monitoring, and study of the parasites transfers from wild to caged fishes” (Supervisor: Bernard Marchand, University of Corte) Member of the Doctoral thesis committees of Johan Decelle (Supervisor: Fabrice Not, CNRS-UPMC, Station Biologique de Roscoff), Damien Cazamea-Catalan (Supervisor: Jack Falcon, CNRS-UPMC, OOB) and Charlotte Schoelinck (Supervisor: Jean-Lou Justine, National Museum of Natural History) Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Jérôme Boissier (Maître de conférences, University of Perpignan), “Ecologie évolutive des interactions hôte-parasite : système et stratégie de la reproduction chez les schistosomes” (“Evolutionary ecology of host-parasite interactions: mating strategies in schistosomes”)

2009

Examiner for the PhD thesis of Laetitia Montes-Poloni, “Relations entre le taux métabolique et la croissance corporelle et squelettique chez les Amniotes” (Supervisor: Jorge Cubo, UPMC) Examiner for the PhD thesis of Matthias Vignon, “Introductions biologiques et parasitisme en milieu récifal : risques et conséquences - L'introduction d'espèces dans l'archipel Hawaiien” (Supervisors: René Galzin and Pierre Sasal, UPMC)

2008

Examiner for the PhD thesis of Damien de Vienne, “Spéciation chez les espèces parasites: approches théoriques et expérimentales” (Supervisor: Tatiana Giraud, University of Paris-Sud) Examiner for the PhD thesis of Mathieu Badets, “Etude de la plasticité de développement de Polystoma gallieni, parasite de la rainette méridionale Hyla meridionalis: approches écologiques et moléculaires” (Supervisor: Olivier Verneau, University of Perpignan)

2007

Member of the Doctoral thesis committees of Laetitia Montes (Supervisor: Jorge Cubo, UPMC), Nicolas Montagné (Supervisor: Jean-Yves Toullec, UPMC) and Frédéric Bordes (Supervisor: Serge Morand, University of Montpellier 2)

2006-2007

Member of the recruiting committee for a Technician of Natural Systems (UPMC, National Museum of Natural History of Paris)

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2005

Examiner for the Habilitation à diriger les recherches (Accreditation to supervise research) of Jorge Cubo (Maître de conférences, UPMC): “Adaptation et évolution du squelette chez les Amniotes” (“Adaptation and skeleton evolution in Amniota”).

TEACHING (notes are available from my web site) Head (with Raphaël Lami) of the International Bachelor Program (since 2017) Dal@SU, a BSc program in marine sciences between Sorbonne-Universités and the Dalhousie University, Halifax, Canada Head of the International Master Program (since 2008) "Integrative biology of marine organisms: fundamental and applied bases" between the UPMC and the Catholic University of Chile. Grant (20000 €) from the Ministère des Etudes Supérieures et de la Recherche for the French-Spanish program (2009-2011, where University of Barcelona was part of the program) Director of the courses at the UPMC "Advanced Biostatistics" (M1 - Master in Integrative Biology and Physiology), "Adaptation and Phylogeny" (M1 - Master in Environmental Sciences > Systematic, Evolution, Paleontology), “Analytical Phylogenetics” (L2, Licence (BSc) in Biology-Mathematics) (2012-2015) Co-director of the Master course "Biological associations in marine and terrestrial environments" (University of Versailles/UPMC) and of the summer school of the OOB “Mediterranean ecology” (until 2010)

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2018

Course at the training for animal experimentation (Paris, SU): Statistics and ethics

2015

Invited Professor at the Masaryk University, Brno, Czech Republic (1 seminar): Evolutionary interactions in an algal host system

2014

Invited Professor at the Sfax University (Tunisia): Giant virus and tiny hosts - marine prasinoviruses Specificity, adaptation and cospeciation in monogeneans

2011

Invited Professor for the 1st Daniel Jouvance-UPMC International School of Marine Biology, Las Cruces, Chile (4 h of courses and practical): Genomes, phylogeny, and lateral gene transfer

2010-2017

Invited Professor at the summer school "Marine Ecological and Evolutionary Genomics" (Roscoff Biological Station, France, 7 h of courses and practical): Coevolution and lateral gene transfers in symbiotic systems

2010

Invited Professor at the Institute of Oceanography and Fisheries, Split, Croatia (27.5 h of courses and practical): Phylogenetic reconstruction and cophylogeny

2008

Invited Professor at the Masaryk University, Brno, Czech Republic (38 h of courses and practical): Phylogenetic Reconstruction: Techniques and Uses

From

2002

Courses and practicals for graduate students, in marine station and at the UPMC (about 200 h/year): Advanced Biostatistics Biometry and Growth in Fishes Data Analysis in Ecology Introduction to Statistics Marine Parasitology Marine Zoology Numerical Ecology Parasitic Pathologies in Aquaculture Phylogenetic Reconstruction Symbioses Use of phylogenies (comparative method, datation, cospeciation, …) Professional integration

2001

Demo at the B.Sc. at the University of Montreal (24 h of courses and practical): Advanced Biostatistics

2000

Courses at the Master of Biology, Populations, and Ecosystems at the University of Perpignan (24 h of courses and practical): Numerical Ecology Parasite Systematic Course at the DEA (Master) of Parasitology at the Universities of Montpellier and Perpignan (3 h): Multidimensional Analysis 12/16

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STUDENT AND POSTDOC SUPERVISION 2018

Anna Marcout (BSc (Licence 2), Université Paris-Diderot). "Diversité morphologique et moléculaire de parasites branchiaux de téléostéens" Jem Cuthbert (BSc (Licence 3), Dalhousie University-SU). "Assessment of ectoparasite community of teleost fishes"

2017

Mathilde Scheifler (PhD thesis, UPMC, 2017-2020). "Determinants of the specificity of fish ectoparasites in the Mediterranean: role of the external microbiota" Co-supervisor of Jade Ezzedine (PhD thesis, Université Grenoble-Alpes, 2017-2020). "Diversity, and quantitative and functional importance of bacterial predators: Bdellovibrio And Like Organisms in a variety of aquatic ecosystems" (Co-supervisor. Supervisor: S. Jacquet, INRA) Magdalena Ruiz-Rodriguez, postdoctoral researcher (1 year) for the MICROFISH Emergence project Michal Benovics (PhD thesis, University Masaryk, Brno, Czech Republic, 4 months at the OOB). Work on the evolution and cophylogeny in Teleost-monogenean associations. Mathilde Scheifler (Master 2, UPMC). "Study of cophylogenetic patterns in symbiotic dinoflagellates and their hosts"

2016

Felipe Benites (Master, University of Rio de Janeiro, Brasil). "Detection of lateral gene transfers in a new viral genome uing a cophylogenetic approach" (co-supervision with G. Piganeau, OOB) Léa Prats (Master 2, Université of Pau). "Spatial and temporal variations of the hatched biomass within and near the Banyuls-Cerbère Natural Marine Reserve: study of the reserve effect and species protection status"

2015

Belen Franco (Master, University of Concepcion, Chile). "Molecular study of the microbiote of copepods from the South Pacific: diversity and coevolution" (Supervisor: Alejandro A. Murillo, collaboration during 1 month)

2014

Mickaël Ros (Master 1, Université of Perpignan Via Domitia). "Quantitative PCR protocol development to estimate the abundance of picoeukaryotes from the class Mamiellophyceae (Chlorophyta)"

2013

Sheree Yau, postdoctoral researcher (18 months) for the DECOVIR ANR project Marine Cambon (Licence 3, Université de Toulouse 3 Paul Sabatier). "Ecology of fish gill parasites from the Algerian coasts: statistical analyses of ecological and epidemiological parameters"

2012

Hugo Lebredonchel (PhD thesis, UPMC, 2012-2016). "Diversity and Environmental Control of Prasinoviruses" Dounia Kheroufi (Master 2, University Montpellier 2). "Search for the genomic determinants of Prasinovirus specificity" Anna Carratala (PhD, University of Barcelona, Spain, 6 months at the OOB). Work on environmental virus diversity. Manon Denjean (Licence (BSc) 2 (undergraduate), ESTBB Lyon). "Monitoring of microalgal virus communities using fingerprinting techniques"

2011

Jérémie Garnodier (Licence 3 (undergraduate), ESTBB Lyon). "Design of a fingerprinting technique for algal virus communities" Fanny Poirier (Master 2, UPMC). "Creation of a relational database on viruses of prasinophyte microalgae"

2009

Camille Clerissi (PhD thesis, UPMC, 2009-2012). "Diversity of marine prasinoviruses at a global scale: is everything everywhere?" Camille Clerissi (Master 2, UPMC). "Specificity in Prasinoviruses and coevolution with their picophytoplanktonic hosts"

2008

Timothée Poisot (Master 2, University Montpellier 2). "Lamellodiscus monogeneans parasites on several Sparid host species: true generalists or ongoing speciation?" Anne Tessier (Master 1, University of La Rochelle). “Study of the impact of recreational fishing on urchin population on the Vermillion Coast (66)”

2007

Pedro de Carvalho Maalouf (Master 1, UPMC). "Study of the spatio-temporal diversity of viruses from picoplanctonic microalgae via RFLP" Timothée Poisot (Summer practical, University of Versailles). "Lamellodiscus monogeneans parasites on several Sparid host species: true generalists or ongoing speciation?"

2006

Laure Bellec (PhD thesis, UPMC, 2006-2009). "Caracterisation and coevolution in the Prasinophyceae-virus system" Kathia Lesdema (Master 2, University of Bordeaux 1). "Biodiversity of Ostreococcus strains in the gulf

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of Lyon" Taous Kaci-Chaouch (Master 2, UPMC). "Adaptation to host and genetic variability in Lamellodiscus spp, gill parasites of sparid fish"

2005

Laure Bellec (Master 1, UPMC). "Influence of different light conditions on the growth of two strains of Ostreococcus (Chlorophyta, Prasinophycea)"

2004

Séverine Jancek (Master 1, UPMC). "Search for ecotypes of Ostreococcus (Chlorophyta, Prasinophycea) at different depths in the bay of Banyuls-sur-Mer" Audrey Guérin (Master 1, UPMC). "Assessment of the biodiversity of fish marine parasites of New-Caledonia: preliminary study in the bay of Noumea"

2000

Jérôme Laporte, (DES-Master, University of Bordeaux 1). "Role of morpho-anatomical variables in the determinism of host specificity: a comparative analysis of the association Lamellodiscus (Diplectanidae, Monogenea)-Diplodus (Teleostei) in the Mediterranean Sea"

1999

Richard Jovelin, (Master 1, University of Sciences and Technologies of Lille). "Study of evolutionary processes in the host-parasite association Pagellus-Lamellodiscus"

ADMINISTRATION AND RESPONSABILITIES • • • • • • • • • • • • • • • • • • • • • • • • • • •

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Leader of the research team Marine Interactions – Evolution and Adaptation (INTERMED), UMR7232, OOB (2017 - ) President (2017, 2016) and member (2015) of the Commission for the attribution of the Grants for Investment in Teaching Innovation (Primes d’Investissement en/et Innovation Pédagogique - PIIP) of the UPMC Member of selection committee for a professor at the UPMC (2017 - 2018) Member of the Commission for the attribution of the Grants for Investment in Research (Primes d’Investissement Recherche - PIR) of the UPMC (2017) Associate Editor for the special volume 2017 "Fish parasites" of Vie et Milieu / Life and Environment Elected member of the Commission Formation et Vie Universitaire of the Academic Council of the UPMC (2015 - 2017) Member of the expert group of the UFR (Faculty) 918 Terre, Environnement, Biodiversité l’UPMC (2015 - ) Elected member of the Department Council of the Master in Integrative Biology, UPMC (2014 - ) President of the Local Evaluation Committee of l’OOB for the programmation of the marine stations vessels for the UMS Flotte Océanographique Française (2013 - 2017) Member of the group X committee for the promotion of UPMC assistant professors (2012 - ) Educational referent for the UPMC in the program IDEFI MIRO.EU-PM (2012 - ) Deputy Director of the OOB (2011 - ) Responsible of teaching coordination at the OOB (2011 - ) Member of the Scientific Committee of the OOB (2011 - ) In charge of the websites of the teaching activities of the OOB and of the IBMO lab Elected president of the Board of Directors of the association managing the restaurant of the OOB (2011 - 2013) Elected representative of the professors from the OOB at the Centre des Sciences de la Mer (2010 - 2012) Member of the Scientific Board of the Marine Natural Reserve of Cerbère-Banyuls (2009 - 2018) Member of selection committee for assistant professors at the University of Perpignan (2009), at the UPMC (2010, 2011, 2015, 2016 - section 68), at the Université Paul Sabatier (Toulouse, 2010 - section 67) and at the Universite of Corte (2010, 2011 - section 68); Member of selection committee for temporary lecturers at the UPMC (2009-2011, 2014-18) Member of the “Conseil de Laboratoire” of the OOB (2009- ) Director of the Aquarium of the OOB (2005 - 2009) Member of the library commission of the OOB (2005 - ) Member of the Commission of Specialists (section 68) of the UPMC (2004 - 2008) Member of the Commission of Specialists (section 68) of the University of Perpignan (2004 - 2008) Associate Editor for the special volume 2008 "Symbioses" of Vie et Milieu / Life and Environment Managing Editor of the journal Vie et Milieu / Life and Environment (2005 - ) Member of the Board of Directors of the OOB (2004 - )

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SYMPOSIUM AND MEETINGS ORGANISATION 2018

Organisation of the Symposium Marine Biotic Interactions Biotiques Marines 2, Observatoire Océanologique de Banyuls, France, 25 June 2018

2016

Organisation (with Raphaël Lami) of the Symposium Marine Biotic Interactions Biotiques Marines, Observatoire Océanologique de Banyuls, France, 2 June 2016

ANIMATION AND POPULARISATION • • • • • • • • • •

Presentation of professions linked to Science at the “Forum des métiers et des formations“ at Argelès-sur-Mer (2016) Conference on evolutionary biology at the Free Time University in Perpignan (2013) Presentation of the activities of the OOB and of the scientist job to high school students (Jean-Lurçat High School, 2011 ; Théza High School, 2014) visiting the OOB Visioconference (2 h) each year since 2013 with high school students from the Alain Fournier High School from Mirande (32) on the marine biologist job Presentation of professions linked to Science at the “Forum des métiers et des formations“ at the Céret High School (2012) Animation with High School students from Perpignan in 2011: observation of marine microfauna Public animation (observation of marine microfauna) during the event "Les Enfants de la Mer", Argelès/Mer, 2009, 2010, 2011, 2013, 2015 Participation to the "Fête de la Science" (2009): workshops for pupils (primary education) on evolutionary tree building. Public conference: "Evolutionary biology: studying the present to understand the past" Participation to the "Fête de la Science" (2006, 2007, 2008, 2014): touch tank, guided tours of the aquarium, evolutionary trees Organisation of guided tours at the Aquarium of the OOB

GRANTS AND AWARDS 2017

Grant from the National Agency of Research (ANR, France, 3 years). "ALGALVIRUS: Genomic Adaptations of Marine Algae to Viruses" (PI: Nigel Grimsley, CNRS, OOB) Winner of the PEPS prize (Passion Enseignement et Pédagogie dans le Supérieur, Ministère de l’Enseignement Supérieur, de la Recherche, et de l’Innovation) in the category "innovation pédagogique, mention numérique" for the e-Marin’Lab program Grant from Sorbonne-Universités (Appel à projets FormInnov) for the project Dal@SU, an international undergraduate program in Marine Sciences (Coordinators: Raphaël Lami and Yves Desdevises, UPMC, OOB) Grant from Sorbonne-Universités (Appel à projets Emergence 2016) for the project Le microbiote des Téléostéens : interactions avec l'environnement (Coordinators: Yves Desdevises and Sébastien Duperron, UPMC, OOB/BOREA)

2015

Grant from Sorbonne-Universités (Appel à projets Numérique 2015) for the project e-Marin’Lab+ (Coordinators: Raphaël Lami and Yves Desdevises, UPMC, OOB) Attribution of the Prime d’Investissement Recherche (Research Involvement Grant) from the UPMC (4 years)

2014

Attribution of the Prime d’Investissement en Innovation Pédagogique (Innovative Teaching Involvement Grant) from the UPMC (4 years) Grant from Sorbonne-Universités (Procédure d’appui aux initiatives pédagogiques du Collège des Licences de la Sorbonne) for the online teaching platform project e-Marin’Lab (Coordinators: Raphaël Lami and Yves Desdevises, UPMC, OOB)

2013

Grant from Sorbonne-Universités (Projets d’initiatives pédagogiques du Collège des Licences de la Sorbonne) pour le projet Immersion (Coordinators: Rodolphe Lemée, UPMC, OOV and Marie-Pascal Debey, MNHN)

2012

Grant from the National Agency of Research (ANR, France, 3 years). "DECOVIR: Diversity and Environmental Control of Prasinoviruses" (Principal Investigator: Yves Desdevises) Grant from the National Agency of Research (ANR, France, 3 years). "REVIREC: Resistance to prasinoviruses analysed by transcriptomics and recombination" (PI: Nigel Grimsley, CNRS, OOB) Investissement d’avenir : Initiatives d'excellence en formations innovantes (IDEFI), project granted 5,5 M€

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MIRO.EU-PM, Master Interdisciplinaire par Regroupement des Organismes Économiques et Universitaires dans le territoire Pyrénées-Méditerranée (Coordinator: Fabrice Lorente, UPVD, Perpignan)

2011

Attribution of the Prime d’Investissement Recherche (Research Involvement Grant) from the UPMC (4 years) Grant from the Institut National des Sciences de l’Univers (INSU, CNRS, France), project Ecosphère Continentale et Côtière (EC2CO, 2 years). "BIOVIR: Spatio-temporal monitoring of the biodiversity of viruses from microalgae" (PI: Yves Desdevises)

2009

Attribution of the Prime d’Investissement Pédagogique (Teaching Involvement Grant) from the UPMC (4 years) Grant in a Hubert Curien Partnership (2 years) with Croatia (Cogito project). "Molecular assessment of transfers of monogenean parasites between wild and cage-reared sparid fish" (Project leaders: Yves Desdevises and Ivona Mladineo, Institute of Oceanography and Fisheries, Split) Grant from the AXA Research Fund for the PhD Thesis of Camille Clerissi (120000 €)

2007

Grant from the National Agency of Research (ANR, France, 3 years). "PICOVIR: Picophytoplankton-virus interactions in a marine ecosystem" (Project leader: Nigel Grimsley, CNRS, OOB) Attribution of the Prime d’Encadrement Doctorale et de Recherche from the UPMC (4 years)

2005

Grant from the National Agency of Research (ANR, France, 3 years). "Macroevolutionary approaches of plantsinsects-bacteria associations" (PI: Emmanuelle Jousselin, INRA)

2002

Postdoctoral scholarship from the Fonds pour la Nature et la Technologie (NATEQ, Quebec, Canada – ranked 1st by the committee, scholarship declined)

2001

Best Student Oral Presentation at the 4th International Symposium on Monogenea (ISM4; 9-13 July, Brisbane, Australie) Student Travel Award from the Organising Committee of the ISM4 Scholarship from the Foundation Joseph-Arthur Paulhus

1999

Scholarship from the Fonds Spécial of the Faculté des Études Supérieures (FES) of the Université de Montréal (UdeM)

1998

Scholarship from the Fonds pour la Formation de Chercheurs et l'Aide à la Recherche (Quebec, Canada) Scholarship from the Fonds Spécial of the FES of the UdeM

1997

Scholarship from the Fonds Spécial of the FES of the UdeM

MISCELLANEOUS • •

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Fluent in French and English Scuba diving (CMAS **)

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