Brain anatomy - René Doursat

synfire chains. Abeles, Bienenstock,. Diesmann (1982, 1995, 1999) after Bienenstock. (1995, 1996). MORPHOGENETIC “NEURON-FLOCKING” physical space ...
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Morphogenetic “neuron flocking”:

Dynamic self-organization of neural activity into mental shapes René Doursat, http://doursat.iscpif.fr Complex Systems Institute, Paris Ile-de-France / Ecole Polytechnique, Paris / CNRS Gif-sur-Yvette, France THE CASE FOR “MENTAL SHAPES (IMAGERY)” FROM THE COGNITIVE PERSPECTIVE “Abstract” representations should not mandate “symbolic”

Example 1: cognitive linguistics, iconic grammar

→ “analogic” formats preserving the underlying combinatorial complexity are critical!

→ Proposal: semantics is a spatio-temporal affair (not nodes in a parse tree)

in

→ Proposal: graphs representing the same object class are structurally similar and can be matched with each other

IN

 traditional logical atomism (set theory): “things” are individuated symbols and “relations” are links connecting these symbols the bird

Example 2: graph representations in vision

TR

(1) (a) the cat in the house

TR

(b) the bird in the garden

 by contrast, in the “Gestaltist” or “mereological” conception, things and relations constitute analogic wholes: relations are not taken for granted but emerge together with the objects through segmentation and transformation

TR

(e) the chair in the corner

LM TR

(f) the water in the vase

TR

Institut fuer Neuroinformatik, Bochum

LM

TR LM

(h) the foot in the stirrup

Bienenstock & Doursat (1994)

LM

(g) the crack in the vase

LM metonymy: vase = surface of vase



TR

(i) ?the finger in the ring

Petitot & Doursat (2011) Cognitive Morphodynamics. Peter-Lang.

TR metonymy: flowers = stems

LM

(d) the bird in the tree

prototype

LM TR

(c) the flowers in the vase

the cage

LM

adapted from Herskovits (1986)

LM

THE CASE FOR “MENTAL SHAPES (PATTERNS) ” FROM THE COMPLEX SYSTEMS PERSPECTIVE The Tower of Complex Systems in Nature

The Tower of Complex Systems in the Brain

 Brain anatomy: from neurons to brain, via neural development

 Mind function: from neurons to mind, via self-organizing objects made of correlated activity

. . .

NetLogo “Fur”

 From cells to patterns and structure, via development

The Tower of Complex Systems in Cognition “John gives a book to Mary”

. . .



“Mary is the owner of the book”

after Bienenstock (1995, 1996)

BlueColumn

ctivator

synfire chains dynamics (stability, chaos, regimes, bifurcations)

nhibitor IR/regular A/sync activity

EXC

Markram (2006)

Abeles, Bienenstock, Diesmann (1982, 1995, 1999) ex: Freeman (1994) polychronous groups morphodynamics bumps, blobs

INH

Vogels & Abbott (2006) Ramón y Cajal 1900

Petitot, Doursat (1997, 2005)

. . .

Izhikevich (2006)

McCulloch & Pitts Hodgkin & Huxley integrate & fire oscillatory, Izhikevich

. . .

ex: Amari (1975)

Hebb STDP LTP/LTD

THE CASE FOR “MENTAL SHAPES (CORRELATIONS) ” FROM THE NEURAL CODE PERSPECTIVE MORPHOGENETIC “NEURON-FLOCKING”

The Brain as a Pattern Formation Machine

Compositionality from Temporal Correlations

 Temporal binding is the “glue” of shape-based composition

 Reminder: the importance of temporal coding  more than mean rates → temporal correlations among spikes high activity rate

phase space view: complex spatiotemporal pattern = mental shape

high activity rate

rate coding

(dynamic)

Mary

emergence? structure? (long-term) persistence? learning? storage? compositionality? properties?

G

book

O

give

John

R

 language, perception, cognition are a game of building blocks

John

high activity rate

G

O

give

book

R

low activity rate

Mary

 mental representations are internally structured

low activity rate low activity rate

physical space view: mega-MEA raster plot = activity of 106-108 neurons

temporal coding

G

 zero-delays: synchrony

after von der Malsburg (1981) and Abeles (1982)

O

give

 elementary components assemble dynamically via temporal binding

ball

R

(1 and 2 more in sync than 1 and 3)

 nonzero delays: rhythms

(4, 5 and 6 correlated through delays)

after Bienenstock (1995)

after Shastri & Ajjanagadde (1993)

EXAMPLE: A Neural Dynamics Model of Pattern Storage and Retrieval – Temporally Coding Coordinates by Phases, and Shapes by Waves  Wave-based pattern retrieval and matching  Lattices of coupled oscillators (zero delays)    

group synchronization traveling waves 2D wave shapes shape metric deformation

+ Ii

 i ← j coupling features  

isotropic proportional to the u signal difference

 

positive connection weight kij possible transmission delay τij

wave propagation chain growth pattern storage and retrieval

o

only in spiking domain u < 0

o

here zero delays τij = 0

i

kij ,τij

coupling term

input term

 Lattice of coupled oscillators – traveling waves  Random propagation z = −0.346, I = 0 k = 0.04

 Circular wave generation z = −0.29, k = 0.10, I = −0.44 (point stimulus

)

j

kij ,τij

 Synfire braids (transitive delays)  

τ= 0

τ= 5

 Synfire chains (uniform delays)   

 Lattice of coupled oscillators

τ = 15

τ= 5

 Planar & mixed wave generation z = −0.29, k = 0.10, I = −0.44 (bar stimulus

shape storage and retrieval 2D wave-matching

)

τ = 10

 Lattice of coupled oscillators – 2D wave shapes

 Lattice of coupled oscillators – shape metric deformation  ex: no deformation: planar & orthogonal waves

 coding coordinates with phases y coordinates

STPy

virtual phase space

o o

uniform weights on PX and PY orthogonal full-bar stimuli

uniform weight distribution:

k = 0.09

PY

 ex: irregular deformation 

heterogeneous waves o o

 ex: “shear stress” and “laminar flow” deformation

 similar to buoys floating on water

PX

 Lattice of coupled oscillators – shape metric deformation



x coordinates

vert./laminar + horiz./vert. wave o o

STPx gradient weight landscape:

k ∈ [0.09, 0.20]

Y-gradient of weights on PY or PX orthogonal full-bar stimuli

random weight distribution (bumps & dips) on PX and PY orthogonal full-bar stimuli

 various weight combinations