Barthelemy SERRES, PhD Contact Information

Apt H96, 46 rue Lucien Jardel 41000 Blois, France French Citizenship website: http://barthelemy.serres.free.fr

+33 6 85 46 34 43 [email protected]

Research Interests

3D Acquisition, Brain Imaging, Virtual Reality, Scientific 3D Visualization, Volume Rendering, GPGPU, Human Computer Interaction

Education

University Francois Rabelais, Tours, France Ph.D., Computer Science, Medical NeuroImaging, July 2013 • Thesis Topic: 3D Acquisition, Visualization of Anatomical Data From Dissection: Application to White Matter • Advisors: Gilles Venturini, Ph.D and Christophe Destrieux, MD, Ph.D Polytech Eng. School, University Francois Rabelais, Tours, France M.S., Computer Science, Sept 2007 • Topic: 3D Large Data Visualization Library Design • Advisor: Gilles Venturini, Ph.D Tours Institute of Technology, University Francois Rabelais, Tours, France B.S., Electronic & Electrical Engineering, Aug 2004 • Electronics, Industrial Networks, Computer Science for Low level Applications

Research Experience

Research Fellow Aug 2013 to present Division of Computer Science, INSERM U930 Lab ”Brain Imaging” University of Tours Supervisors: Pr G. Venturini And Pr C. Destrieux Research Assistant Jan 2010 to Aug 2013 Division of Computer Science, INSERM U930 Lab ”Brain Imaging” University of Tours Supervisors: Pr G. Venturini And Pr C. Destrieux Research Engineer Sept 2007 to Dec 2009 INRIA Rennes Bretagne Atlantique IRISA - Bunraku, Technology transfered to Golaem SA Supervisors: S. Donikian, Ph.D and F. Lamarche, Ph.D. Research Engineer IRCAD R& D, IRCAD/EITS Softwares Supervisors: L. Soler, Ph.D and J. Moreau, M.S.

Referred Journal * Publications

Summer 2007

[1] Serres, B., Zemmoura, I., Andersson, F., Tauber, C., Destrieux, C., Venturini, G., 2011a. Acquisition and interactive 3d exploration of the internal structure of a dissected specimen. In: Engineering in Medicine and Biology Society, 33th Annual International Conference of the IEEE. Boston (MA), USA, pp. 4461–4464.

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[2] Serres, B., Zemmoura, I., Andersson, F., Tauber, C., Destrieux, C., Venturini, G., 2013. Brain virtual dissection and white matter 3d visualization. Studies in Health Technology and Informatics 184, 392–396. [3] Serres, B., Zemmoura, I., Destrieux, C., Venturini, G., 2011b. Acquisition, visualisation 3d et interactions pour le suivi de dissection. In: proc. of Symposium pour l’Ingnierie de l’Information Mdicale (SIIM). Vol. 1. Toulouse, France, pp. 103– 110.

Submitted Journal * Publications

Papers in Preparation *

Presentations

[1] Zemmoura, I., Serres, B., Andersson, F., Tauber, C., Cottier, J.-P., Venturini, G., Destrieux, C., (2013). Fibrascan: A novel method for white mater tracts 3d reconstruction in mr space from cadaveric dissection. Submitted to NeuroImage.

[1] Serres, B., Zemmoura, I., Andersson, F., Tauber, C., Destrieux, C., Venturini, G., 2013. High fidelity 3d ground truth building from 3d laser acquisitions, in progress.

Computer Science Meetings, Workshops • NextMed/MMVR20, San Diego, CA • IEEE Engineering for Medical and Biological Society, Boston, MA • Symposium on Medical Engineering Information, 2011 Toulouse, France • Workshop on 3D Interfaces for Data Discovery, Brest, France

Feb Sept May Jan

2013 2011 2011 2010

Center of Biomedical Imaging/MGH/HMS, Boston MA, USA (Visiting Student) • Advances in 3D Acquisition for Dissection Monitoring Sept 2011 Presentation to Research & Industrial Partners • GE HealthCare, Buc, France • GE HealthCare, Velizy, France • CEA-Neurospin, Gif-sur-Yvette, France Teaching Experience

Dec 2011 May 2012 May 2013

Instructor Springs 2012 Algorithmics: Complexity studies, Advanced Structures and Analysis Division of Computer Science Polytech Eng. School - University of Tours, France Instructor Springs 2010–11 Software Design - Libraries for C++ - MS Level Division of Computer Science, Polytech Eng. School - University of Tours, France Instructor Spring 2010 Software Design - Java Programming - MS Level Division of Computer Science, Polytech Eng. School - University of Tours, France Teaching Assistant Springs 2011–12 Languages C/C++ - BS level Instructor: J. Olivier, Ph.D Eng. School Val de Loire, Blois, France Internship supervisor 2010–13 2 of 3

8 Master’s Thesis supervision. Computer Science Engineer Degree (Genetic Algorithms/3D Visualization/Haptics) Polytech Eng. School - University of Tours, France Service

Member of the Communication Committee of SFR FED4226 May 2012 – Present • Assist with board, meeting planning and scientific newsletter edition • Website manager of the Neuroscience Research structure • Project Coordinator • Recruitment for Students (Internships) Student Member of Lab Council

Jan 2010 – Jan 2013

• Representative of CS lab PhD Students • Applications Reviewer, Papers pre-reviewing • Meeting/Talk organizing Collaborations

• CEA-Neurospin, French Atomic Committee (Saclay) Gif-sur-Yvette, France • A. Martinos Center Of Biomedical Imaging, Boston, MA, USA

Computational Skills

References

Level of Expertise Expert Intermediate Basic

Script/Programming Languages C, C++, GLSL, Java CUDA, Perl, Python, SQL asm x86, Verilog, VHDL, PHP

Pr. Gilles Venturini Full Professor in Computer Science, Polytech Eng. School University of Tours, France

Libraries OpenGL, Qt, VTK OpenCV, ITK, MySQL

Sci. Softwares Scilab, Matlab Maple R

Phone: +33 247-361-433 E-mail: [email protected]

Pr. Christophe Destrieux Full Professor in Anatomy, Phone: +33 247-366-136 Medical School/ Unit 930 ”Brain Imaging” E-mail: [email protected] Senior Neuro Surgeon, Head of Anatomical Lab INSERM(french eq. of National Institute of Heath) University of Tours, France

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